The local search explore conformation within 10-20 angstrom RMS from the upload starting conformation. The server will return the structures with the best energies, plot of the energy landscape, and the full set of the thousand decoy structures explored.
Email address and protein names are optional. If an email is specified, notification will be sent when the job is complete.
Each user is limited to 5 docking tasks (per IP address).
The PDB file format is detailed at www.rcsb.org/pdb/static.do?p=file_formats/pdb/index.html