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    2017
  1. Mathew M*, Tan E*, Labonte JW*, Shah S, Saeui CT, Liu L, Bhattacharya R, Bovonratwet P, Gray JJ & Yarema K, "Glycoengineering of esterase activity through metabolic flux-based modulation of sialic acid.," ChemBioChem  (Available in Early View) (2017) Online (*Equal contribution authors).
  2. Newman HA, Meluh PB, Lu J, Vidal J, Carson C, Lagesse E, et al. "A high throughput mutagenic analysis of yeast sumo structure and function.," PLoS Genet  13(2) (2017) Online.
  3. Alford RF, Leaver-Fay A, Jeliazkov JR, O'Meara MJ, DiMaio FD, Park H, Shapovalov MV, Renfrew PD, Mulligan VK, Kappel K, Labonte JW, Pacella MS, Bonneau R, Bradley P, Dunbrack RL, Das R, Baker D, Kuhlman B, Kortemme T & Gray JJ "The Rosetta all-atom energy function for macromolecular modeling and design," J. Chem. Theor. Comput.  (Web) (2017) Online.
  4. Jiang W, Pacella MS, Athansiadou D, Nelea V, Vali H, Hazen RM, Gray JJ, & McKee MD "Chiral acidic amino acids induce chiral hierarchical structure in calcium carbonate," Nature Communications  8 (2017) Online.
  5. Residue-Centric Modeling and Design of Saccharide and Glycoconjugate StructuresLabonte JW, Adolf-Bryfogle J, Schief WR, & Gray JJ "Residue-Centric Modeling and Design of Saccharide and Glycoconjugate Structures," J. Comput. Chem.  38(5) (2017) Online.
  6. Modeling and docking antibody structures with RosettaWeitzner BD, Jeliazkov JR, Lyskov S, Marze N, Kuroda D, Frick R, Adolf-Bryfogle A, Biswas N & Gray JJ "Modeling and docking antibody structures with Rosetta," Nature Protocols  12(2) (2017) Online.
  7. Koehler Leman J., Mueller B.K. & Gray J.J. "Expanding the toolkit for membrane protein modeling in Rosetta," Bioinformatics  33(5) (2017) Online.
  8. Weitzner BD & Gray JJ "Accurate structure prediction of CDR H3 loops enabled by a novel structure-based C-terminal constraint," J. Immunology  198(1) (2017) Online.
  9. Marze NA, Jeliazkov JR, Roy Burman SS, Boyken SE & Gray JJ "Modeling oblong proteins and water-mediated interfaces with RosettaDock in CAPRI rounds 28-35," Proteins  85(3) (2017) Online DOI: 10.1002/prot.25168.
  10. 2016
  11. Marze, N. A. & Gray, J. J. "Improved Prediction of Antibody VL-VH Orientation," Protein Eng. Des. Sel.  29(10) (2016) Online.
  12. Piepenbrik KH, Lillehoj E, Harding CM, Labonte JW, Zuo X, Rapp CA, Munson RS, Goldblum SE, Feldman MF, Gray JJ & Sundberg EJ "Structural diversity in the type IV pili of multidrug-resistant Acinetobacter," J. Biol. Chem.  291 (2016) Online.
  13. Kuroda, D & Gray, J.J. "Pushing the Backbone in Protein-Protein Docking," Structure  24(10) (2016) Online.
  14. Lensink, M., Velankar, S., Kryshtafovych, A., Huang, S., Duhovny-Schneidman, D., Sali, A., ... Marze, N., Roy Burman, S., Kuroda, D., Gray, J. J., ... and Wodak, S. [82 authors total] "Prediction of homo- and hetero-protein complexes by protein docking and template-based modeling: a CASP-CAPRI experiment," Proteins  84(51) (2016).
  15. Kuroda, D. & Gray, J. J. "Shape complementarity of hydrogen bond preferences in protein-protein interfaces: Implications for antibody modeling and protein-protein docking," Bioinformatics  32(16) (2016) Online.
  16. DeKosky, B. J.,* Lungu, O.I.,* Park, D., Johnson, E. L., Charab, W., Chrysostomou, C., Kuroda, D., Ellington, A. D., Ippolito, G. C., Gray, J. J., & Georgiou, G. "Large-Scale Sequence and Structural Comparisons of Human Naive and Antigen-Experienced Antibody Repertoires," Proc. Natl. Acad. Sci. USA  113(19) (2016) Online (*these authors contriubted equally to this work).
  17. 2015
  18. R. F. Alford, J. Koehler Leman, B. D. Weitzner, A. M. Duran, D. C. Tilley, A. Elazar & J. J. Gray "An integrated framework advancing membrane protein modeling and design," PLoS Comput. Biol.  11(9) (2015) Online.
  19. Pierre, B., Labonte, J. W., Xiong, T., Aoraha, E., Williams, A., Shah, V., Chau, E., Helal, K. Y., Gray, J. J. & Kim, J. R. "Molecular determinants for protein stabilization by insertional fusion to a thermophilic host protein," ChemBioChem  16(16) (2015) Online.
  20. I. Matlahov, T. Iline-Vul, M. Abayev, E. M.-Y. Lee, M. Nadav-Tsubery, K. Keinan-Adamsky, J. J. Gray & G. Goobes "Interfacial mineral-peptide properties of a mineral binding peptide from osteonectin and bone-like apatite," Chem. Mater.  27(16) (2015) Online.
  21. Functional Loss of Semaphorin 3C and/or Semaphorin 3D and Their Epistatic Interaction with Ret Are Critical to Hirschsprung Disease LiabilityJiang, Q., Arnold, S., Heanue, T., Kilambi, K. P., Doan, B., Kapoor, A., Ling, A. Y., Sosa, M. X., Guy, M., Jiang, Q., Burzynski, G., West, K., Bessling, S., Griseri, P., Amiel, J., Fernandez, R. M., Verheij, J. B. G. M., Hofstra, R. M. W., Borrego, S., Lyonnet, S., Ceccherini, I., Gray, J. J., Pachnis, V., McCallion, A. S. & Chakravarti, A. "Functional Loss of Semaphorin 3C and/or Semaphorin 3D and Their Epistatic Interaction with Ret Are Critical to Hirschsprung Disease Liability," Am. J. Human Genetics  96(4) (2015) Online.
  22. Weitzner, B. D., Dunbrack, R. & J. J. Gray. "The origin of CDR H3 structural diversity," Structure  23(2) (2015) Online.
  23. J. Koehler Leman, M. B. Ulmschneider & J. J. Gray. "Computational Modeling of Membrane Proteins," Proteins  83(1) (2015) Online.
  24. 2014
  25. Kilambi, K. P., Reddy, K. & J. J. Gray. "Protein-protein docking with dynamic residue protonation states," PLoS Computational Biology  10(12) (2014) Online.
  26. B. Weitzner,* D. Kuroda,* N. Marze, J. Xu, & J. J. Gray. "Blind Prediction Performance of RosettaAntibody 3.0: Grafting, Relaxation, Kinematic Loop Modeling, and CDR Optimization," Proteins  82(8) (2014) Online (*these authors contriubted equally to this work).
  27. A Comprehensive, High-Resolution Map of a Gene's Fitness LandscapeFirnberg, E., Labonte, J. W., Gray, J. J. & Ostermeier, M. "A Comprehensive, High-Resolution Map of a Gene's Fitness Landscape," Mol. Biol. Evol.  31(6) (2014) Online.
  28. Xu, J., Tack, D., Hughes, R. A., Ellington, A. D., & Gray, J. J. "Structure-based Non-canonical Amino Acid Design to Covalently Crosslink an Antibody-Antigen Complex," J. Struct. Biol.  185(2) (2014) Online.
  29. Lensink, M. F., Moal, I. H., Bates, P.A., Kastritis, P. L., Melquiond, A.S.J., Karaca, E., Schmitz, C., van Dijk, M., Bonvin, A. M. J. J., Eisenstein, M., Jiménez-García, B., Grosdidier, S., Solernou, A., Pérez-Cano, L., Pallara, C., Fernández-Recio, J., Xu, J., Muthu, P., Kilambi, K. P., Gray, J. J., Grudinin, S., Derevyanko, G., Mitchell, J. C., Wieting, J., Kanamori, E., Tsuchiya, Y., Murakami, Y., Sarmiento, J., Standley, D. M., Shirota, M., Kinoshita, K., Nakamura, H., Chavent, M., Ritchie, D. W., Park, H., Ko, J., Lee, H., Seok, C., Shen, Y., Kozakov, D., Vajda, S., Kundrotas, P. J., Vakser, I. A., Pierce, B. G., Hwang, H., Vreven, T., Weng, Z., Buch, I., Farkash, E., Wolfson, H. J., Zacharias, M., Qin, S., Zhou, H.-X., Huang, S.-Y., Zou, X., Wojdyla, J. A., Kleanthous, C., and Wodak, S. J. "Blind Prediction of Interfacial Water Positions in CAPRI," Proteins  82(4) (2014) Online.
  30. 2013
  31. Kilambi, K. P., Pacella, M. S., Xu, J., Labonte, J., Porter, J., Muthu, P., Drew, K., Kuroda, D., Schueler-Furman, O., Bonneau, R., & Gray, J. J. "Extending RosettaDock with water, sugar, and pH for prediction of complex structures and affinities for CAPRI rounds 20-27," Proteins  81(12) (2013) Online.
  32. Pacella, M. S., Koo, D. C. E., Thottungal, R. A., & Gray, J. J. "Using the RosettaSurface Algorithm to Predict Protein Structure at Mineral Surfaces," Meth. Enz.  532 (2013) Online.
  33. Moretti, R., Fleishman, S. J., Agius, R., Torchala, M., Bates, P.A., ... Pacella, M., Kilambi, K. P., Gray, J. J., ... Velankar, S., Janin, J., Wodak, S. J., and Baker, D. (about 70 total authors) "Community-wide Evaluation of Methods for Predicting the Effect of Mutations on Protein-Protein Interactions," Proteins  81(11) (2013) Online.
  34. Drew, K., Renfrew, P. D., Craven, T., Butterfoss, G. L., Chou, F.-C., Lyskov, S., Bullock, B. N., Watkins, A., Labonte, J. W., Pacella, M., Kilambi, K. P., Leaver-Fay, A., Kuhlman, B., Gray, J. J., Bradley, P., Kirshenbaum, K., Arora, P. S., Das, R., & Bonneau, R. "Adding Diverse Noncanonical Backbones to Rosetta: Enabling Peptidomimetic Design," PLoS One  8(7) (2013) Online.
  35. Der, B. S., Kluwe, C., Miklos, A. E., Jacak, R., Lyskov, S., Gray, J. J., Georgiou, G., Ellington, A. D. & Kuhlman, B. "Alternative computational protocols for supercharging protein surfaces for reversible unfolding and retention of stability," PLoS One  8(5) (2013) Online.
  36. Lyskov, S.*, Chou F.-C.*, Conchúir, S. Ó., Der, B. S., Drew, K., Kuroda, D., Xu, J., Renfrew, P. D., Sripakdeevong, P., Borgo, B., Havranek, J. J., Kuhlman, B., Kortemme, T., Bonneau, R., Gray, J. J.;, Das, R.; "Serverification of Molecular Modeling Applications: the Rosetta Online Server that Includes Everyone (ROSIE)," PLoS One  8(5) (2013) Online (*these authors contriubted equally to this work; ;co-corresponding authors).
  37. Leaver-Fay, A., O'Meara, M., J., Tyka, M., Jacak, R., Song, Y., Kellogg, E. H., Thompson, J., Davis, I. W., Pache, R. A., Lyskov, S., Gray, J. J., Kortemme, T., Richardson, J. S., Havranek, J. J., Snoeyink, J., Baker, D. & Kuhlman, B. "Scientific Benchmarks for Guiding Macromolecular Energy Function Improvement," Meth. Enz.  523 (2013) Online.
  38. Tarasevich, B. J., Perez-Salas, U. Masica, D. L., Philo, J., Kienzle, P., Srueger, S., Majkrzak, C. F., Gray, J. J., and Shaw, W. J. "Neutron Reflectometry Studies of the Adsorbed Structure of the Amelogenin, LRAP," J. Phys. Chem. B  117(11) (2013) Online.
  39. 2012
  40. B. Chaikind, K. P. Kilambi, J. J. Gray and M. Ostermeier "Targeted DNA Methylation Using an Artificially Bisected M.HhaI Fused to Zinc Fingers," PLoS One  7(9) (2012) Online.
  41. K. P. Kilambi and J. J. Gray "Rapid Calculation of Protein pKa Values using Rosetta," Biophys. J.  103(3) (2012) Online.
  42. Y. Ye, M. R. Stahley, J. Xu, J. I. Friedman, Y. Sun, J. N. McKnight, J. J. Gray, G. D. Bowman and J. T. Stivers "Enzymatic Excision of Uracil Residues in Nucleosomes Depends on the Local DNA Structure and Dynamics," Biochemistry  51(30) (2012) Online.
  43. A. E. Miklos, C. Kluwe, B. S. Der, S. Pai, A. Sircar, R. A. Hughes, M. Berrondo, J. Xu, V. Codrea, P. E. Buckley, A. M. Calm, H. S. Welsh, C. R. Warner, M. A. Zacharko, J. P. Carney, J. J. Gray, G. Georgiou, B. Kuhlman, A. D. Ellington "Structure-Based Design of Supercharged, Highly Thermoresistant Antibodies," Chemistry & Biology  19(4) (2012) Online.
  44. 2011
  45. S. B. Schrier, M. K. Sayeg, & J. J. Gray "Prediction of Calcite Morphology from Computational and Experimental Studies of Mutations of a De Novo Designed Peptide," Langmuir  27(18) (2011) Online.
  46. S. J. Fleishman, T. A. Whitehead, E. M. Strauch and about 95 others including K. P. Kilambi, A. Sircar, and J. J. Gray "Community-wide assessment of protein-interface modeling suggests improvements to design methodology," J. Mol. Biol.  414(2) (2011) Online.
  47. Benchmarking and analysis of protein docking performance in RosettaDock 3.2S. Chaudhury, M. Berrondo, B. D. Weitzner, P. Muthu, H. Bergman, & J. J. Gray "Benchmarking and analysis of protein docking performance in RosettaDock 3.2," PLoS One  6(8) (2011) Online.
  48. E. Baugh, S. Lyskov, B. D. Weitzner, & J. J. Gray "Real-time PyMOL visualization for Rosetta and PyRosetta," PLoS One  6(8) (2011) Online.
  49. M. Berrondo & J. J. Gray "Computed structures of point deletion mutants and their enzymatic activities," Proteins  79(10) (2011) Online (Featured Cover Art).
  50. D. L. Masica, J. J. Gray; & W. Shaw; "Partial high-resolution structure of phosphorylated and non-phosphorylated leucine-rich amelogenin protein adsorbed to hydroxyapatite," J. Phys. Chem. C  115(28) (2011) Online (co-corresponding authors).
  51. Analysis and Modeling of the Variable Region of Camelid Single Domain AntibodiesA. Sircar, K. A. Sanni, J. Shi, & J. J. Gray "Analysis and Modeling of the Variable Region of Camelid Single Domain Antibodies," J. Immunology  186(11) (2011) Online | Supplementary Material.
  52. M. D. McKee, Y. Nakano, D. L. Masica, J. J. Gray, I. Lemire, R. Heft, P. Crine, & J. L. Millan "Enzyme Replacement Therapy Prevents Dental Defects in a Model of Hypophosphatasia," J. Dental Res.  90(4) (2011) Online (Featured Cover Art).
  53. A. Leaver-Fay, M. Tyka, S. M. Lewis, O. F. Lange, J. Thompson, R. Jacak, K. Kaufman, P. D. Renfrew, C. A. Smith, W. Sheffler, I. W. Davis, S. Cooper, A. Treuille, D. J. Mandell, F. Fichter, Y.-E. A. Ban., S. J. Fleishman, J. E. Corn., D. E. Kim, S. Lyskov, M. Berrondo, S. Mentzer, Z. Popovic, J. J. Havranek, J. Karanicolas, R. Das, J. Meiler, T. Kortemme, J. J. Gray, B. Kuhlman, D. Baker, P. Bradley "Rosetta3: An object-oriented software suite for the simulation and design of macromolecules," Meth. Enz.  487 (2011) Online.
  54. Mechanism of polyubiquitin chain recognition by the human ubiquitin conjugating enzyme Ube2g2W. E. Bocik, A. Sircar, J. J. Gray; & J. R. Tolman; "Mechanism of polyubiquitin chain recognition by the human ubiquitin conjugating enzyme Ube2g2," J. Biol. Chem.  286(5) (2011) Online (co-corresponding authors).
  55. 2010
  56. D. L. Masica, J. Ashworth, M. Ndao, G. Drobny & J. J. Gray "Toward a structure determination method for biomineral-associated protein using combined solid-state NMR and computational structure prediction," Structure  18(12) (2010) Online.
  57. B. Keshet, J. J. Gray & T. A. Good "Structurally distinct toxicity inhibitors bind at common loci on beta-amyloid fibril," Prot. Sci.  19(12) (2010) Online.
  58. D. L. Masica, S. B. Schrier, E. Specht & J. J. Gray "De novo design of peptide-calcite biomineralization systems," J. Am. Chem. Soc.  132(35) (2010) Online.
  59. A. Sircar, S. Chaudhury, K. P. Kilambi, M. Berrondo & J. J. Gray "A generalized approach to sampling backbone conformations with RosettaDock for CAPRI rounds 13-19," Proteins  78(15) (2010) Online.
  60. M. Berrondo, J. J. Gray & R. Schleif "Computational predictions of the mutant behavior of AraC," J. Mol. Biol.  398(3) (2010) Online.
  61. PyRosetta: a script-based interface for implementing molecular modeling algorithms using RosettaS. Chaudhury, S. Lyskov & J. J. Gray "PyRosetta: a script-based interface for implementing molecular modeling algorithms using Rosetta," Bioinformatics  26(5) (2010) Online.
  62. A. Sircar & J. J. Gray "SnugDock: Paratope structural optimization during antibody-antigen docking compensates for errors in antibody homology models," PLoS Comput. Biol.  6(1) (2010) Online.
  63. W. N. Addison, D. L. Masica, J. J. Gray & M. D. McKee "Phosphorylation-dependent inhibition of mineralization by osteopontin ASARM peptides is regulated by PHEX cleavage," J. Bone & Mineral Research  25(4) (2010) Online.
  64. 2009
  65. S. Chaudhury & J. J. Gray "Identification of structural mechanisms of HIV-1 protease specificity using computational peptide docking and implications for drug resistance," Structure  17(12) (2009) Online.
  66. Y.-C. Chien, D. L. Masica, J. J. Gray, S. Nguyen, H. Vali & M. D. McKee "Modulation of calcium oxalate dehydrate growth by selective crystal-face binding of phosphorylated osteopontin and poly-aspartate peptide showing occlusion by sectoral (compositional) zoning," J. Biol. Chem.  284 (2009) Online.
  67. A. Sircar,* E. Kim* & J. J. Gray "RosettaAntibody: Antibody Variable Region Homology Modeling Server," Nucleic Acids Research  37(Web Server Issue) (2009) Online (*these authors contriubted equally to this work).
  68. D. L. Masica & J. J. Gray "Solution- and adsorbed-state structural ensembles predicted for the statherin-hydroxyapatite system," Biophys. J.  96(8) (2009) Online.
  69. M.D. Daily & J. J. Gray "Allosteric communication occurs via networks of tertiary and quaternary motions in proteins," PLoS Comput. Biol.  5(2) (2009) Online.
  70. Toward high-resolution homology modeling of antibody Fv regions and application to antibody-antigen docking A. Sivasubramanian,* A. Sircar,* S. Chaudhury & J. J. Gray "Toward high-resolution homology modeling of antibody Fv regions and application to antibody-antigen docking," Proteins  74(2) (2009) Online (*these authors contriubted equally to this work).
  71. 2008
  72. S. Chaudhury & J. J. Gray "Conformer selection and induced fit in flexible backbone protein-protein docking using computational and NMR ensembles," J. Mol. Biol.  381(4) (2008) Online.
  73. S. Lyskov & J. J. Gray "The RosettaDock server for local protein-protein docking," Nucleic Acids Research  36(Web Server Issue) (2008) Online.
  74. K. Pickin, S. Chaudhury, B. Dancy, J. J. Gray & P. Cole "Analysis of protein kinase autophosphorylation using expressed protein ligation and computational modeling," J. Am. Chem. Soc.  130(17) (2008) Online.
  75. Structure prediction of domain insertion proteins from structures of the individual domainsM. Berrondo, M. Ostermeier & J. J. Gray "Structure prediction of domain insertion proteins from structures of the individual domains," Structure  16(4) (2008) Online.
  76. M.D. Daily, T.J. Upadhyaya & J. J. Gray "Contact rearrangements form coupled networks from local motions in allosteric proteins," Proteins  71(1) (2008) Online | Supplementary Material.
  77. Modeling the structure of mAb 14B7 bound to the anthrax protective antigenA. Sivasubramanian, J. A. Maynard, & J. J. Gray "Modeling the structure of mAb 14B7 bound to the anthrax protective antigen," Proteins  70(1) (2008) Online.
  78. 2007
  79. K. Makrodimitris, D. L. Masica, E. T. Kim & J. J. Gray "Structure prediction of protein-solid surface interactions reveals a molecular recognition motif of statherin for hydroxyapatite," J. Am. Chem. Soc.  129(44) (2007) Online.
  80. S. Chaudhury,* A. Sircar,* A. Sivasubramanian, M. Berrondo & J. J. Gray "Incorporating biochemical information and backbone flexibility in RosettaDock for CAPRI rounds 6-12," Proteins  69(4) (2007) Online (*these authors contriubted equally to this work).
  81. J. Meitzler, J. J. Gray & T. L. Hendrickson "Truncation of the caspase-related subunit (Gpi8p) of Saccharomyces cerevisiae GPI transamidase: Dimerization revealed," Arch. Biochem. Biophys.  462(1) (2007) Online.
  82. M. D. Daily & J. J. Gray "Local motions in a benchmark of allosteric proteins," Proteins  67(2) (2007) Online | Supplementary Material.
  83. 2006
  84. Gray, J.J. "Biomolecular Modeling in a Process Dynamics and Control Course," Chemical Engineering Education  40(4) (2006) Online.
  85. High-resolution protein-protein dockingGray, J.J. "High-resolution protein-protein docking," Curr. Op. Struct. Biol.  16(2) (2006) Online.
  86. A. Sivasubramanian, G. Chao, H.M. Pressler, K.D. Witrup, and J.J. Gray "Structural model of the mAb 806-EGFR complex using computational docking followed by computational and experimental mutagenesis," Structure  14(3) (2006) Online.
  87. 2005
  88. M.D. Daily, D. Masica, A. Sivasubramanian, S. Somarouthu, and J.J. Gray "CAPRI rounds 3-5 reveal promising successes and future challenges for RosettaDock," Proteins  60(2) (2005) Online.
  89. P. Singh, A.M. Mhaka, S.B. Christensen, J.J. Gray, S.R. Denmeade, and J.T. Isaacs "Applying linear interaction energy method for rational design of non-competitive allosteric inhibitors of the SERCA ATPase," J. Med. Chem.  48(8) (2005) Online.
  90. 2004
  91. Gray, J.J. "The Interaction of Proteins with Solid Surfaces," Curr. Op. Struct. Biol.  14(1) (2004) Online.
  92. 2003
  93. Gray, J.J., S.E. Moughan, T. Kortemme, O. Schueler-Furman, K.M.S. Misura, A.V. Morozov, D. Baker "Protein-Protein Docking Predictions for the CAPRI Experiment," Proteins  52(1) (2003) Online.
  94. Gray, J.J., S.E. Moughan, C. Wang, O. Schueler-Furman, B. Kuhlman, C.A. Rohl, D. Baker "Protein-Protein Docking with Simultaneous Optimization of Rigid-Body Displacement and Side-Chain Conformations," J. Mol. Biol.  331(1) (2003) Online.
  95. 2001
  96. Gray, J.J., D.H. Klein, B.A. Korgel, R.T. Bonnecaze "Microstructure formation and kinetics in the random sequential adsorption of polydisperse tethered nanoparticles modeled as hard disks," Langmuir  17(8) (2001) Online.
  97. Adsorption of colloidal particles by Brownian dynamics simulation: kinetics and surface structuresGray, J.J., R.T. Bonnecaze "Adsorption of colloidal particles by Brownian dynamics simulation: kinetics and surface structures," J. Chem. Phys.  114(3) (2001) Online.
  98. Gray, J.J., R. T. Bonnecaze "Adsorption of charge-bidisperse mixtures of colloidal particles," Langmuir  17(25) (2001) Online.
  99. 2000 & Older
  100. Gray, J.J., D.H. Klein, R.T. Bonnecaze, B.A. Korgel "Non-equilibrium phase behavior during the random sequential adsorption of tethered hard disks," Phys. Rev. Lett.  85(21) (2000) Online.
  101. Origin of anomalous multibody interactionsGray, J.J., B. Chiang, R.T. Bonnecaze "Origin of anomalous multibody interactions," Nature  402 (1999) Online (brief communication).
  102. Gray, J.J., R.T. Bonnecaze "Rheology and dynamics of sheared arrays of colloidal particles," J. Rheology  42(5) (1998) Online.
  103. Lee, G.M., J.J. Gray, and B.O. Palsson "Effect of trisodium citrate treatment on hybridoma cell viability," Biotechnology Techniques  5(4) (1991).